Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxb3P09026 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.79■□□□□ 0.6
Hoxb3P09026 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.79■□□□□ 0.6
Hoxb3P09026 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxb3P09026 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Gm6365-201ENSMUST00000054711 744 ntBASIC18.79■□□□□ 0.6
Hoxb3P09026 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxb3P09026 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Hoxb3P09026 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hoxb3P09026 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxb3P09026 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb3P09026 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxb3P09026 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb3P09026 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hoxb3P09026 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.78■□□□□ 0.6
Hoxb3P09026 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb3P09026 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hoxb3P09026 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb3P09026 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxb3P09026 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hoxb3P09026 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxb3P09026 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 Gm7290-201ENSMUST00000104990 617 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Gm12918-201ENSMUST00000120234 636 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Gm15710-201ENSMUST00000121821 636 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Gm5075-201ENSMUST00000196916 622 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxb3P09026 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.77■□□□□ 0.6
Hoxb3P09026 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxb3P09026 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
Hoxb3P09026 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Hoxb3P09026 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm11249-201ENSMUST00000117071 859 ntBASIC18.76■□□□□ 0.59
Hoxb3P09026 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm6433-201ENSMUST00000118634 875 ntBASIC18.76■□□□□ 0.59
Hoxb3P09026 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm27275-201ENSMUST00000184318 272 ntBASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxb3P09026 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.76■□□□□ 0.59
Hoxb3P09026 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxb3P09026 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Hoxb3P09026 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.75■□□□□ 0.59
Hoxb3P09026 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxb3P09026 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb3P09026 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.75■□□□□ 0.59
Hoxb3P09026 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb3P09026 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Hoxb3P09026 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.75■□□□□ 0.59
Hoxb3P09026 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb3P09026 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxb3P09026 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Hoxb3P09026 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hoxb3P09026 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hoxb3P09026 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxb3P09026 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxb3P09026 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxb3P09026 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxb3P09026 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.73■□□□□ 0.59
Hoxb3P09026 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.73■□□□□ 0.59
Hoxb3P09026 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.73■□□□□ 0.59
Hoxb3P09026 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxb3P09026 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb3P09026 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb3P09026 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxb3P09026 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms