Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1BO75841 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 AC098818.2-201ENST00000564925 2320 ntBASIC18.69■□□□□ 0.58
UPK1BO75841 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UPK1BO75841 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1BO75841 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UPK1BO75841 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UPK1BO75841 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.69■□□□□ 0.58
UPK1BO75841 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UPK1BO75841 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.68■□□□□ 0.58
UPK1BO75841 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.68■□□□□ 0.58
UPK1BO75841 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UPK1BO75841 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.68■□□□□ 0.58
UPK1BO75841 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPK1BO75841 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
UPK1BO75841 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPK1BO75841 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK1BO75841 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK1BO75841 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
UPK1BO75841 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.66■□□□□ 0.58
UPK1BO75841 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
UPK1BO75841 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1BO75841 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1BO75841 AC093536.1-201ENST00000569153 554 ntBASIC18.66■□□□□ 0.58
UPK1BO75841 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK1BO75841 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UPK1BO75841 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK1BO75841 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPK1BO75841 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK1BO75841 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK1BO75841 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK1BO75841 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1BO75841 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UPK1BO75841 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.65■□□□□ 0.58
UPK1BO75841 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 AL049796.1-201ENST00000565336 1766 ntBASIC18.65■□□□□ 0.58
UPK1BO75841 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UPK1BO75841 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK1BO75841 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms