Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm29257-201ENSMUST00000186115 639 ntBASIC17.46■□□□□ 0.39
BckdkO55028 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.46■□□□□ 0.38
BckdkO55028 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BckdkO55028 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.45■□□□□ 0.38
BckdkO55028 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
BckdkO55028 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
BckdkO55028 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BckdkO55028 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BckdkO55028 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BckdkO55028 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BckdkO55028 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
BckdkO55028 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.43■□□□□ 0.38
BckdkO55028 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.43■□□□□ 0.38
BckdkO55028 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.43■□□□□ 0.38
BckdkO55028 Gm37179-201ENSMUST00000194862 823 ntBASIC17.43■□□□□ 0.38
BckdkO55028 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BckdkO55028 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.43■□□□□ 0.38
BckdkO55028 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BckdkO55028 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BckdkO55028 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.43■□□□□ 0.38
BckdkO55028 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.43■□□□□ 0.38
BckdkO55028 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BckdkO55028 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BckdkO55028 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
BckdkO55028 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BckdkO55028 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
BckdkO55028 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
BckdkO55028 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BckdkO55028 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BckdkO55028 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BckdkO55028 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BckdkO55028 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.41■□□□□ 0.38
BckdkO55028 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.41■□□□□ 0.38
BckdkO55028 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BckdkO55028 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.41■□□□□ 0.38
BckdkO55028 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BckdkO55028 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BckdkO55028 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.4■□□□□ 0.38
BckdkO55028 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BckdkO55028 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BckdkO55028 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
BckdkO55028 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.39■□□□□ 0.37
BckdkO55028 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 Gm13234-201ENSMUST00000120010 747 ntBASIC17.39■□□□□ 0.37
BckdkO55028 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BckdkO55028 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BckdkO55028 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.39■□□□□ 0.37
BckdkO55028 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.39■□□□□ 0.37
BckdkO55028 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.39■□□□□ 0.37
BckdkO55028 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms