Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 AC027682.1-201ENST00000562846 899 ntBASIC22.96■■□□□ 1.27
FOXN3O00409 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.96■■□□□ 1.27
FOXN3O00409 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
FOXN3O00409 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
FOXN3O00409 AL136967.2-201ENST00000623968 743 ntBASIC22.96■■□□□ 1.27
FOXN3O00409 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.96■■□□□ 1.27
FOXN3O00409 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN3O00409 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.96■■□□□ 1.27
FOXN3O00409 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXN3O00409 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN3O00409 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN3O00409 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
FOXN3O00409 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN3O00409 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.95■■□□□ 1.26
FOXN3O00409 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN3O00409 AL034346.1-201ENST00000568244 1277 ntBASIC22.95■■□□□ 1.26
FOXN3O00409 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXN3O00409 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
FOXN3O00409 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN3O00409 MIR939-201ENST00000401314 82 ntBASIC22.94■■□□□ 1.26
FOXN3O00409 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.94■■□□□ 1.26
FOXN3O00409 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN3O00409 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 AF213884.3-201ENST00000563833 479 ntBASIC22.94■■□□□ 1.26
FOXN3O00409 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN3O00409 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.94■■□□□ 1.26
FOXN3O00409 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
FOXN3O00409 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXN3O00409 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.94■■□□□ 1.26
FOXN3O00409 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
FOXN3O00409 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
FOXN3O00409 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXN3O00409 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.93■■□□□ 1.26
FOXN3O00409 TSPY26P-201ENST00000476365 1326 ntBASIC22.93■■□□□ 1.26
FOXN3O00409 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.93■■□□□ 1.26
FOXN3O00409 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.93■■□□□ 1.26
FOXN3O00409 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.93■■□□□ 1.26
FOXN3O00409 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.93■■□□□ 1.26
FOXN3O00409 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXN3O00409 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXN3O00409 RASA4CP-201ENST00000424092 1398 ntBASIC22.92■■□□□ 1.26
FOXN3O00409 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 AC003102.1-202ENST00000563394 1796 ntBASIC22.92■■□□□ 1.26
FOXN3O00409 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 SUDS3P1-201ENST00000505831 966 ntBASIC22.92■■□□□ 1.26
FOXN3O00409 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.92■■□□□ 1.26
FOXN3O00409 AL139246.5-201ENST00000606645 996 ntBASIC22.92■■□□□ 1.26
FOXN3O00409 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.92■■□□□ 1.26
FOXN3O00409 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXN3O00409 Z98882.1-201ENST00000622160 2253 ntBASIC22.92■■□□□ 1.26
FOXN3O00409 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXN3O00409 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXN3O00409 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
FOXN3O00409 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXN3O00409 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
FOXN3O00409 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.91■■□□□ 1.26
FOXN3O00409 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
FOXN3O00409 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.91■■□□□ 1.26
FOXN3O00409 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXN3O00409 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXN3O00409 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
FOXN3O00409 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
FOXN3O00409 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FOXN3O00409 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.91■■□□□ 1.26
FOXN3O00409 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
FOXN3O00409 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.9■■□□□ 1.26
FOXN3O00409 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
FOXN3O00409 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
FOXN3O00409 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.9■■□□□ 1.26
FOXN3O00409 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.9■■□□□ 1.26
FOXN3O00409 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FOXN3O00409 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms