Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 MIR663A-201ENST00000385250 93 ntBASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 AP006587.3-201ENST00000525742 1516 ntBASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 AC138907.5-202ENST00000569484 235 ntBASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 AL109923.1-201ENST00000618799 583 ntBASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 MYCNOS-205ENST00000641950 531 ntBASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3FA6NER0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 AC104771.1-201ENST00000603335 964 ntBASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 AC231657.2-201ENST00000624556 255 ntBASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.33■■□□□ 1.01
TBC1D3FA6NER0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.33■■□□□ 1
TBC1D3FA6NER0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.33■■□□□ 1
TBC1D3FA6NER0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TBC1D3FA6NER0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D3FA6NER0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D3FA6NER0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 AC007322.1-201ENST00000426983 750 ntBASIC21.32■■□□□ 1
TBC1D3FA6NER0 NCF1B-203ENST00000435988 1254 ntBASIC21.32■■□□□ 1
TBC1D3FA6NER0 AC010141.2-201ENST00000452426 721 ntBASIC21.32■■□□□ 1
TBC1D3FA6NER0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 DUX4L16-201ENST00000555130 1264 ntBASIC21.32■■□□□ 1
TBC1D3FA6NER0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TBC1D3FA6NER0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TBC1D3FA6NER0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 AC139530.1-201ENST00000575312 1977 ntBASIC21.31■■□□□ 1
TBC1D3FA6NER0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.31■■□□□ 1
TBC1D3FA6NER0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TBC1D3FA6NER0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TBC1D3FA6NER0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TBC1D3FA6NER0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TBC1D3FA6NER0 GPX1P1-201ENST00000388829 606 ntBASIC21.3■■□□□ 1
TBC1D3FA6NER0 KRT18P20-201ENST00000548986 1279 ntBASIC21.3■■□□□ 1
TBC1D3FA6NER0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.3■■□□□ 1
TBC1D3FA6NER0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.3■■□□□ 1
TBC1D3FA6NER0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms