Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGA3Q9Y5H0 AC004854.2-201ENST00000608450 1441 ntBASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 KRT19P1-201ENST00000405746 1186 ntBASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 HLA-L-209ENST00000420110 1011 ntBASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGA3Q9Y5H0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 CDCA4P2-201ENST00000441182 718 ntBASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 AC073111.5-205ENST00000641717 521 ntBASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA3Q9Y5H0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGA3Q9Y5H0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGA3Q9Y5H0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGA3Q9Y5H0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGA3Q9Y5H0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
PCDHGA3Q9Y5H0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 BID-214ENST00000617586 542 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 SLC25A24-204ENST00000569674 2357 ntBASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 AL353803.4-201ENST00000565882 1934 ntBASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA3Q9Y5H0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 AC026185.1-201ENST00000445748 174 ntBASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA3Q9Y5H0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms