Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-4Q9EQM3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-4Q9EQM3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx2-4Q9EQM3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-4Q9EQM3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-4Q9EQM3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
Nkx2-4Q9EQM3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.58■□□□□ 0.73
Nkx2-4Q9EQM3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Gm21362-201ENSMUST00000194272 928 ntBASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-4Q9EQM3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-4Q9EQM3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Nkx2-4Q9EQM3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-4Q9EQM3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-4Q9EQM3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-4Q9EQM3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-4Q9EQM3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms