Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE2E2Q96LR5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2E2Q96LR5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 AC055733.4-201ENST00000638462 1354 ntBASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2E2Q96LR5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 KRT87P-202ENST00000534226 1464 ntBASIC16.61■□□□□ 0.25
UBE2E2Q96LR5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 KRT19P1-201ENST00000405746 1186 ntBASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 AP004607.4-201ENST00000530158 1459 ntBASIC16.6■□□□□ 0.25
UBE2E2Q96LR5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
UBE2E2Q96LR5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms