Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 AC068587.7-201ENST00000641602 218 ntBASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC44A1Q8WWI5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
SLC44A1Q8WWI5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SLC44A1Q8WWI5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 AC073130.3-201ENST00000624389 2278 ntBASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC44A1Q8WWI5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC44A1Q8WWI5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 AC099791.2-201ENST00000605725 427 ntBASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC44A1Q8WWI5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 OR2I1P-207ENST00000453522 948 ntBASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC44A1Q8WWI5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC44A1Q8WWI5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 MIR3181-201ENST00000578512 73 ntBASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC44A1Q8WWI5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.45■■□□□ 1.03
SLC44A1Q8WWI5 AL157384.1-201ENST00000445995 2473 ntBASIC21.45■■□□□ 1.02
SLC44A1Q8WWI5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC44A1Q8WWI5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC44A1Q8WWI5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms