Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.59■□□□□ 0.73
Trim60Q8VI40 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim60Q8VI40 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim60Q8VI40 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim60Q8VI40 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim60Q8VI40 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim60Q8VI40 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim60Q8VI40 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim60Q8VI40 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim60Q8VI40 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim60Q8VI40 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim60Q8VI40 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Gm15039-201ENSMUST00000118914 875 ntBASIC19.55■□□□□ 0.72
Trim60Q8VI40 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim60Q8VI40 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim60Q8VI40 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim60Q8VI40 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.54■□□□□ 0.72
Trim60Q8VI40 Gm43137-201ENSMUST00000198052 594 ntBASIC19.54■□□□□ 0.72
Trim60Q8VI40 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim60Q8VI40 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.53■□□□□ 0.72
Trim60Q8VI40 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim60Q8VI40 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms