Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 SUDS3P1-201ENST00000505831 966 ntBASIC20.71■□□□□ 0.91
KRT78Q8N1N4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT78Q8N1N4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
KRT78Q8N1N4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT78Q8N1N4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 AC005837.3-201ENST00000612163 286 ntBASIC20.69■□□□□ 0.9
KRT78Q8N1N4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
KRT78Q8N1N4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 FAM99A-202ENST00000538190 1989 ntBASIC20.68■□□□□ 0.9
KRT78Q8N1N4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
KRT78Q8N1N4 AP004607.7-201ENST00000527152 1677 ntBASIC20.67■□□□□ 0.9
KRT78Q8N1N4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 SMUG1P1-201ENST00000590640 811 ntBASIC20.67■□□□□ 0.9
KRT78Q8N1N4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT78Q8N1N4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 LINC00565-201ENST00000562710 2331 ntBASIC20.66■□□□□ 0.9
KRT78Q8N1N4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT78Q8N1N4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
KRT78Q8N1N4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms