Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf4Q8K4J2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.29■□□□□ 0.36
Ebf4Q8K4J2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Gm43530-201ENSMUST00000195920 274 ntBASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf4Q8K4J2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf4Q8K4J2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf4Q8K4J2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf4Q8K4J2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf4Q8K4J2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebf4Q8K4J2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms