Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scube3Q66PY1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scube3Q66PY1 Gm13534-201ENSMUST00000121169 513 ntBASIC19.91■□□□□ 0.78
Scube3Q66PY1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.91■□□□□ 0.78
Scube3Q66PY1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scube3Q66PY1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scube3Q66PY1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.91■□□□□ 0.78
Scube3Q66PY1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Scube3Q66PY1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.9■□□□□ 0.78
Scube3Q66PY1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scube3Q66PY1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.89■□□□□ 0.77
Scube3Q66PY1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scube3Q66PY1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.88■□□□□ 0.77
Scube3Q66PY1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scube3Q66PY1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scube3Q66PY1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.86■□□□□ 0.77
Scube3Q66PY1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Scube3Q66PY1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scube3Q66PY1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.84■□□□□ 0.77
Scube3Q66PY1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scube3Q66PY1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scube3Q66PY1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms