Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Gm13148-201ENSMUST00000118892 745 ntBASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom1Q5SX79 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom1Q5SX79 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Gm6420-201ENSMUST00000193885 723 ntBASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Shroom1Q5SX79 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Gm6365-201ENSMUST00000054711 744 ntBASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shroom1Q5SX79 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shroom1Q5SX79 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shroom1Q5SX79 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shroom1Q5SX79 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Shroom1Q5SX79 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shroom1Q5SX79 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms