Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 AC099791.1-201ENST00000416440 715 ntBASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 AC133561.4-201ENST00000566112 224 ntBASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNAI3Q3KNW1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 AP001330.3-201ENST00000520123 633 ntBASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.61■□□□□ 0.57
SNAI3Q3KNW1 AP004607.7-201ENST00000527152 1677 ntBASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 IGHV3-19-201ENST00000521488 291 ntBASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 AC027682.1-201ENST00000562846 899 ntBASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAI3Q3KNW1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 EDA-201ENST00000338901 1233 ntBASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.59■□□□□ 0.57
SNAI3Q3KNW1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SNAI3Q3KNW1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SNAI3Q3KNW1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAI3Q3KNW1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 AL355001.2-201ENST00000620617 1191 ntBASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 AC244015.2-201ENST00000616358 1861 ntBASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAI3Q3KNW1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms