Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pfdn6Q03958 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pfdn6Q03958 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pfdn6Q03958 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19■□□□□ 0.63
Pfdn6Q03958 Gm27801-201ENSMUST00000184174 223 ntBASIC19■□□□□ 0.63
Pfdn6Q03958 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19■□□□□ 0.63
Pfdn6Q03958 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19■□□□□ 0.63
Pfdn6Q03958 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pfdn6Q03958 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Pfdn6Q03958 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pfdn6Q03958 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.99■□□□□ 0.63
Pfdn6Q03958 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn6Q03958 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pfdn6Q03958 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn6Q03958 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.97■□□□□ 0.63
Pfdn6Q03958 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn6Q03958 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.96■□□□□ 0.63
Pfdn6Q03958 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.96■□□□□ 0.63
Pfdn6Q03958 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn6Q03958 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pfdn6Q03958 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn6Q03958 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Pfdn6Q03958 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pfdn6Q03958 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Gm43017-201ENSMUST00000198296 752 ntBASIC18.94■□□□□ 0.62
Pfdn6Q03958 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pfdn6Q03958 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn6Q03958 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.94■□□□□ 0.62
Pfdn6Q03958 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn6Q03958 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms