Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1aP97445 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1aP97445 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1aP97445 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1aP97445 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Cacna1aP97445 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Cacna1aP97445 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.52■□□□□ 0.39
Cacna1aP97445 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1aP97445 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cacna1aP97445 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.51■□□□□ 0.39
Cacna1aP97445 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Cacna1aP97445 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.51■□□□□ 0.39
Cacna1aP97445 Gm25925-201ENSMUST00000158314 306 ntBASIC17.51■□□□□ 0.39
Cacna1aP97445 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Cacna1aP97445 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cacna1aP97445 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.51■□□□□ 0.39
Cacna1aP97445 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Cacna1aP97445 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1aP97445 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.5■□□□□ 0.39
Cacna1aP97445 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.5■□□□□ 0.39
Cacna1aP97445 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.5■□□□□ 0.39
Cacna1aP97445 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.5■□□□□ 0.39
Cacna1aP97445 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.5■□□□□ 0.39
Cacna1aP97445 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.5■□□□□ 0.39
Cacna1aP97445 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.5■□□□□ 0.39
Cacna1aP97445 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1aP97445 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Gm10698-201ENSMUST00000182663 604 ntBASIC17.49■□□□□ 0.39
Cacna1aP97445 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.49■□□□□ 0.39
Cacna1aP97445 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1aP97445 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1aP97445 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1aP97445 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1aP97445 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1aP97445 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Cacna1aP97445 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Cacna1aP97445 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1aP97445 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.47■□□□□ 0.39
Cacna1aP97445 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1aP97445 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.46■□□□□ 0.39
Cacna1aP97445 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Cacna1aP97445 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cacna1aP97445 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1aP97445 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms