Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 MRH4YGL064C 1686 nt3.68□□□□□ -1.82
VPS9P54787 NHP10YDL002C 612 nt3.68□□□□□ -1.82
VPS9P54787 FAD1YDL045C 921 nt3.68□□□□□ -1.82
VPS9P54787 YDR336WYDR336W 945 nt3.68□□□□□ -1.82
VPS9P54787 SUP56tL(CAA)A 82 nt3.68□□□□□ -1.82
VPS9P54787 SUP53tL(CAA)C 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)DtL(CAA)D 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)G1tL(CAA)G1 82 nt3.68□□□□□ -1.82
VPS9P54787 SUP54tL(CAA)G2 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)G3tL(CAA)G3 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)KtL(CAA)K 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)LtL(CAA)L 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)MtL(CAA)M 82 nt3.68□□□□□ -1.82
VPS9P54787 tL(CAA)NtL(CAA)N 82 nt3.68□□□□□ -1.82
VPS9P54787 SOL3YHR163W 750 nt3.68□□□□□ -1.82
VPS9P54787 DCG1YIR030C 735 nt3.68□□□□□ -1.82
VPS9P54787 AHP1YLR109W 531 nt3.68□□□□□ -1.82
VPS9P54787 RLP7YNL002C 969 nt3.68□□□□□ -1.82
VPS9P54787 YNL035CYNL035C 1170 nt3.68□□□□□ -1.82
VPS9P54787 HNT3YOR258W 654 nt3.68□□□□□ -1.82
VPS9P54787 DER1YBR201W 636 nt3.68□□□□□ -1.82
VPS9P54787 VPS53YJL029C 2469 nt3.68□□□□□ -1.82
VPS9P54787 SYT1YPR095C 3681 nt3.68□□□□□ -1.82
VPS9P54787 DBP5YOR046C 1449 nt3.68□□□□□ -1.82
VPS9P54787 MSM1YGR171C 1728 nt3.67□□□□□ -1.82
VPS9P54787 ALG8YOR067C 1734 nt3.67□□□□□ -1.82
VPS9P54787 GPI10YGL142C 1851 nt3.67□□□□□ -1.82
VPS9P54787 PWP2YCR057C 2772 nt3.67□□□□□ -1.82
VPS9P54787 NTH1YDR001C 2256 nt3.67□□□□□ -1.82
VPS9P54787 RRN6YBL014C 2685 nt3.67□□□□□ -1.82
VPS9P54787 TAN1YGL232W 870 nt3.67□□□□□ -1.82
VPS9P54787 YJR112W-AYJR112W-A 330 nt3.67□□□□□ -1.82
VPS9P54787 YLR290CYLR290C 834 nt3.67□□□□□ -1.82
VPS9P54787 YLR412C-AYLR412C-A 207 nt3.67□□□□□ -1.82
VPS9P54787 NIS1YNL078W 1224 nt3.67□□□□□ -1.82
VPS9P54787 IZH2YOL002C 954 nt3.67□□□□□ -1.82
VPS9P54787 YOR022CYOR022C 2148 nt3.67□□□□□ -1.82
VPS9P54787 TRS120YDR407C 3870 nt3.67□□□□□ -1.82
VPS9P54787 GPI13YLL031C 3054 nt3.67□□□□□ -1.82
VPS9P54787 TAF1YGR274C 3201 nt3.66□□□□□ -1.82
VPS9P54787 FRE4YNR060W 2160 nt3.66□□□□□ -1.82
VPS9P54787 GPP2YER062C 753 nt3.66□□□□□ -1.82
VPS9P54787 RSM26YJR101W 801 nt3.66□□□□□ -1.82
VPS9P54787 YKL162CYKL162C 1209 nt3.66□□□□□ -1.82
VPS9P54787 GLO1YML004C 981 nt3.66□□□□□ -1.82
VPS9P54787 RIB4YOL143C 510 nt3.66□□□□□ -1.82
VPS9P54787 RAS1YOR101W 930 nt3.66□□□□□ -1.82
VPS9P54787 RPS10AYOR293W 318 nt3.66□□□□□ -1.82
VPS9P54787 YPL035CYPL035C 348 nt3.66□□□□□ -1.82
VPS9P54787 YPR077CYPR077C 372 nt3.66□□□□□ -1.82
VPS9P54787 CCM1YGR150C 2595 nt3.66□□□□□ -1.82
VPS9P54787 REB1YBR049C 2433 nt3.65□□□□□ -1.82
VPS9P54787 SPA2YLL021W 4401 nt3.65□□□□□ -1.82
VPS9P54787 YCR024C-BYCR024C-B 267 nt3.65□□□□□ -1.83
VPS9P54787 TSC13YDL015C 933 nt3.65□□□□□ -1.83
VPS9P54787 YGR161W-CYGR161W-C 279 nt3.65□□□□□ -1.83
VPS9P54787 POP8YBL018C 402 nt3.65□□□□□ -1.83
VPS9P54787 MRPS9YBR146W 837 nt3.65□□□□□ -1.83
VPS9P54787 MAL12YGR292W 1755 nt3.65□□□□□ -1.83
VPS9P54787 MAL32YBR299W 1755 nt3.65□□□□□ -1.83
VPS9P54787 RIM4YHL024W 2142 nt3.65□□□□□ -1.83
VPS9P54787 URA2YJL130C 6645 nt3.65□□□□□ -1.83
VPS9P54787 RDS2YPL133C 1341 nt3.65□□□□□ -1.83
VPS9P54787 EBS1YDR206W 2655 nt3.64□□□□□ -1.83
VPS9P54787 CLB3YDL155W 1284 nt3.64□□□□□ -1.83
VPS9P54787 LIF1YGL090W 1266 nt3.64□□□□□ -1.83
VPS9P54787 EPT1YHR123W 1176 nt3.64□□□□□ -1.83
VPS9P54787 CFD1YIL003W 882 nt3.64□□□□□ -1.83
VPS9P54787 SAW1YAL027W 786 nt3.64□□□□□ -1.83
VPS9P54787 EMC2YJR088C 879 nt3.64□□□□□ -1.83
VPS9P54787 YJR128WYJR128W 360 nt3.64□□□□□ -1.83
VPS9P54787 HOT13YKL084W 351 nt3.64□□□□□ -1.83
VPS9P54787 MOH1YBL049W 417 nt3.64□□□□□ -1.83
VPS9P54787 SSP2YOR242C 1116 nt3.64□□□□□ -1.83
VPS9P54787 YBR137WYBR137W 540 nt3.64□□□□□ -1.83
VPS9P54787 YGL140CYGL140C 3660 nt3.64□□□□□ -1.83
VPS9P54787 YDL199CYDL199C 2064 nt3.64□□□□□ -1.83
VPS9P54787 CGR1YGL029W 363 nt3.63□□□□□ -1.83
VPS9P54787 GTT1YIR038C 705 nt3.63□□□□□ -1.83
VPS9P54787 YJR071WYJR071W 369 nt3.63□□□□□ -1.83
VPS9P54787 PCD1YLR151C 1023 nt3.63□□□□□ -1.83
VPS9P54787 DGA1YOR245C 1257 nt3.63□□□□□ -1.83
VPS9P54787 ARA1YBR149W 1035 nt3.63□□□□□ -1.83
VPS9P54787 ARG2YJL071W 1725 nt3.63□□□□□ -1.83
VPS9P54787 YTM1YOR272W 1383 nt3.63□□□□□ -1.83
VPS9P54787 MRPL11YDL202W 750 nt3.62□□□□□ -1.83
VPS9P54787 RRG1YDR065W 1098 nt3.62□□□□□ -1.83
VPS9P54787 YDR535CYDR535C 501 nt3.62□□□□□ -1.83
VPS9P54787 SOP4YJL192C 705 nt3.62□□□□□ -1.83
VPS9P54787 YKT6YKL196C 603 nt3.62□□□□□ -1.83
VPS9P54787 SYC1YOR179C 567 nt3.62□□□□□ -1.83
VPS9P54787 RRP36YOR287C 903 nt3.62□□□□□ -1.83
VPS9P54787 SUT2YPR009W 807 nt3.62□□□□□ -1.83
VPS9P54787 RRP7YCL031C 894 nt3.62□□□□□ -1.83
VPS9P54787 RRP5YMR229C 5190 nt3.62□□□□□ -1.83
VPS9P54787 MIP6YHR015W 1980 nt3.62□□□□□ -1.83
VPS9P54787 HCA4YJL033W 2313 nt3.61□□□□□ -1.83
VPS9P54787 HUL5YGL141W 2733 nt3.61□□□□□ -1.83
VPS9P54787 PTI1YGR156W 1278 nt3.61□□□□□ -1.83
VPS9P54787 SDS3YIL084C 984 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 75.9 ms