Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 AL034346.1-201ENST00000568244 1277 ntBASIC19.09■□□□□ 0.65
CSNK1A1P48729 AC005837.3-201ENST00000612163 286 ntBASIC19.09■□□□□ 0.65
CSNK1A1P48729 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1A1P48729 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1A1P48729 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.08■□□□□ 0.65
CSNK1A1P48729 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1A1P48729 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1A1P48729 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1A1P48729 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CSNK1A1P48729 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1A1P48729 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CSNK1A1P48729 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 FAM99A-202ENST00000538190 1989 ntBASIC19.07■□□□□ 0.64
CSNK1A1P48729 MIR638-201ENST00000385237 100 ntBASIC19.07■□□□□ 0.64
CSNK1A1P48729 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.07■□□□□ 0.64
CSNK1A1P48729 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 SMUG1P1-201ENST00000590640 811 ntBASIC19.07■□□□□ 0.64
CSNK1A1P48729 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 LINC00565-201ENST00000562710 2331 ntBASIC19.07■□□□□ 0.64
CSNK1A1P48729 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CSNK1A1P48729 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1A1P48729 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CSNK1A1P48729 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 AP004607.7-201ENST00000527152 1677 ntBASIC19.06■□□□□ 0.64
CSNK1A1P48729 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 AC105233.4-201ENST00000642045 216 ntBASIC19.06■□□□□ 0.64
CSNK1A1P48729 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1A1P48729 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1A1P48729 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.05■□□□□ 0.64
CSNK1A1P48729 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CSNK1A1P48729 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms