Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Gm10849-201ENSMUST00000100397 618 ntBASIC15.22■□□□□ 0.03
Cd27P41272 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.22■□□□□ 0.03
Cd27P41272 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.22■□□□□ 0.03
Cd27P41272 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
Cd27P41272 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cd27P41272 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd27P41272 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cd27P41272 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd27P41272 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cd27P41272 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.21■□□□□ 0.03
Cd27P41272 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd27P41272 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Cd27P41272 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.2■□□□□ 0.02
Cd27P41272 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Cd27P41272 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cd27P41272 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.2■□□□□ 0.02
Cd27P41272 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.2■□□□□ 0.02
Cd27P41272 Gm42778-201ENSMUST00000199644 553 ntBASIC15.2■□□□□ 0.02
Cd27P41272 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd27P41272 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Gm13534-201ENSMUST00000121169 513 ntBASIC15.19■□□□□ 0.02
Cd27P41272 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.19■□□□□ 0.02
Cd27P41272 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.19■□□□□ 0.02
Cd27P41272 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cd27P41272 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cd27P41272 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd27P41272 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cd27P41272 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cd27P41272 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd27P41272 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cd27P41272 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.18■□□□□ 0.02
Cd27P41272 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cd27P41272 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Golph3-205ENSMUST00000228671 2842 ntBASIC15.18■□□□□ 0.02
Cd27P41272 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd27P41272 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
Cd27P41272 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cd27P41272 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd27P41272 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd27P41272 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cd27P41272 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd27P41272 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd27P41272 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.16■□□□□ 0.02
Cd27P41272 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd27P41272 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd27P41272 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd27P41272 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms