Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK1BO75841 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.75■□□□□ 0.59
UPK1BO75841 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.75■□□□□ 0.59
UPK1BO75841 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.75■□□□□ 0.59
UPK1BO75841 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.75■□□□□ 0.59
UPK1BO75841 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UPK1BO75841 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK1BO75841 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UPK1BO75841 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.74■□□□□ 0.59
UPK1BO75841 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 AP006261.1-201ENST00000584783 668 ntBASIC18.74■□□□□ 0.59
UPK1BO75841 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK1BO75841 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK1BO75841 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
UPK1BO75841 AC073314.1-201ENST00000568729 2216 ntBASIC18.73■□□□□ 0.59
UPK1BO75841 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.73■□□□□ 0.59
UPK1BO75841 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPK1BO75841 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.73■□□□□ 0.59
UPK1BO75841 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1BO75841 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.72■□□□□ 0.59
UPK1BO75841 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK1BO75841 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
UPK1BO75841 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
UPK1BO75841 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UPK1BO75841 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UPK1BO75841 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.71■□□□□ 0.59
UPK1BO75841 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UPK1BO75841 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK1BO75841 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
UPK1BO75841 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
UPK1BO75841 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK1BO75841 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 RP9P-202ENST00000450133 1212 ntBASIC18.7■□□□□ 0.58
UPK1BO75841 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.7■□□□□ 0.58
UPK1BO75841 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UPK1BO75841 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.7■□□□□ 0.58
UPK1BO75841 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms