Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.53■□□□□ 0.4
BckdkO55028 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
BckdkO55028 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.52■□□□□ 0.4
BckdkO55028 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.52■□□□□ 0.4
BckdkO55028 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.52■□□□□ 0.4
BckdkO55028 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BckdkO55028 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.52■□□□□ 0.4
BckdkO55028 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BckdkO55028 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BckdkO55028 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BckdkO55028 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.52■□□□□ 0.39
BckdkO55028 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BckdkO55028 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BckdkO55028 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BckdkO55028 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BckdkO55028 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BckdkO55028 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.51■□□□□ 0.39
BckdkO55028 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BckdkO55028 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.5■□□□□ 0.39
BckdkO55028 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Gm10033-202ENSMUST00000211874 928 ntBASIC17.5■□□□□ 0.39
BckdkO55028 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.5■□□□□ 0.39
BckdkO55028 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BckdkO55028 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BckdkO55028 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.49■□□□□ 0.39
BckdkO55028 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BckdkO55028 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.49■□□□□ 0.39
BckdkO55028 Gm27801-201ENSMUST00000184174 223 ntBASIC17.49■□□□□ 0.39
BckdkO55028 AV356131-201ENSMUST00000206201 750 ntBASIC17.49■□□□□ 0.39
BckdkO55028 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BckdkO55028 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BckdkO55028 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.48■□□□□ 0.39
BckdkO55028 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.48■□□□□ 0.39
BckdkO55028 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
BckdkO55028 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Gm9988-201ENSMUST00000069786 435 ntBASIC17.48■□□□□ 0.39
BckdkO55028 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.48■□□□□ 0.39
BckdkO55028 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BckdkO55028 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
BckdkO55028 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
BckdkO55028 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
BckdkO55028 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.47■□□□□ 0.39
BckdkO55028 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.47■□□□□ 0.39
BckdkO55028 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Golph3-205ENSMUST00000228671 2842 ntBASIC17.47■□□□□ 0.39
BckdkO55028 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BckdkO55028 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
BckdkO55028 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BckdkO55028 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BckdkO55028 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BckdkO55028 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms