Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Shisa8J3QNX5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa8J3QNX5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shisa8J3QNX5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Gm7417-201ENSMUST00000192950 473 ntBASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shisa8J3QNX5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shisa8J3QNX5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shisa8J3QNX5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shisa8J3QNX5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shisa8J3QNX5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa8J3QNX5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa8J3QNX5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shisa8J3QNX5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms