Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 AC006970.2-201ENST00000450065 779 ntBASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 AP001160.3-201ENST00000601484 763 ntBASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.42■■□□□ 1.02
TBC1D3FA6NER0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3FA6NER0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 UBE2DNL-204ENST00000602536 740 ntBASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3FA6NER0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
TBC1D3FA6NER0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.39■■□□□ 1.02
TBC1D3FA6NER0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TBC1D3FA6NER0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TBC1D3FA6NER0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
TBC1D3FA6NER0 AC087742.1-201ENST00000575880 1738 ntBASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 CROCCP5-201ENST00000436658 830 ntBASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 MFSD11-216ENST00000590393 1141 ntBASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3FA6NER0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 AC137767.1-201ENST00000602918 1920 ntBASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3FA6NER0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TBC1D3FA6NER0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3FA6NER0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3FA6NER0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms