Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav10A0A075B642 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav10A0A075B642 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav10A0A075B642 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.79■□□□□ 0.28
Trav10A0A075B642 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.79■□□□□ 0.28
Trav10A0A075B642 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav10A0A075B642 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav10A0A075B642 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav10A0A075B642 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.78■□□□□ 0.28
Trav10A0A075B642 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav10A0A075B642 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.78■□□□□ 0.28
Trav10A0A075B642 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav10A0A075B642 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav10A0A075B642 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav10A0A075B642 Golph3-205ENSMUST00000228671 2842 ntBASIC16.77■□□□□ 0.27
Trav10A0A075B642 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav10A0A075B642 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav10A0A075B642 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav10A0A075B642 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav10A0A075B642 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav10A0A075B642 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav10A0A075B642 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms