Protein–RNA interactions for Protein: Q9EQM5

Rhox9, Homeobox protein GPBOX, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox9Q9EQM5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rhox9Q9EQM5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 AA386476-201ENSMUST00000098781 1665 ntBASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rhox9Q9EQM5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Gm11175-201ENSMUST00000116172 543 ntBASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rhox9Q9EQM5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Fst-202ENSMUST00000223640 2612 ntBASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rhox9Q9EQM5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rhox9Q9EQM5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Gm45444-201ENSMUST00000211394 898 ntBASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.77■□□□□ 0.44
Rhox9Q9EQM5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rhox9Q9EQM5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rhox9Q9EQM5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rhox9Q9EQM5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rhox9Q9EQM5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rhox9Q9EQM5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms