Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx41Q91VN6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ddx41Q91VN6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx41Q91VN6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx41Q91VN6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx41Q91VN6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx41Q91VN6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx41Q91VN6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx41Q91VN6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx41Q91VN6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ddx41Q91VN6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx41Q91VN6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.75■■□□□ 1.07
Ddx41Q91VN6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx41Q91VN6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx41Q91VN6 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.75■■□□□ 1.07
Ddx41Q91VN6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.74■■□□□ 1.07
Ddx41Q91VN6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx41Q91VN6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Golph3-205ENSMUST00000228671 2842 ntBASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx41Q91VN6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.71■■□□□ 1.07
Ddx41Q91VN6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx41Q91VN6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ddx41Q91VN6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.7■■□□□ 1.06
Ddx41Q91VN6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx41Q91VN6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Gm7514-201ENSMUST00000209475 934 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms