Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 OR7E47P-201ENST00000546390 1422 ntBASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 MIR6724-1-201ENST00000616420 92 ntBASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 MIR6724-2-201ENST00000616483 92 ntBASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 MIR6724-4-201ENST00000617390 92 ntBASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 MIR6724-3-201ENST00000622482 92 ntBASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC44A1Q8WWI5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SLC44A1Q8WWI5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC44A1Q8WWI5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC44A1Q8WWI5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC44A1Q8WWI5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC44A1Q8WWI5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC44A1Q8WWI5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC44A1Q8WWI5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 AC006455.2-201ENST00000429931 906 ntBASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SLC44A1Q8WWI5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 AC009299.2-201ENST00000482477 511 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 AC104564.3-201ENST00000582367 638 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 pRNA.6-201ENST00000610482 90 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 pRNA.5-201ENST00000612139 90 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 pRNA.11-201ENST00000618423 90 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 pRNA.13-201ENST00000619112 90 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 PKD1P6-201ENST00000343738 4769 ntBASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC44A1Q8WWI5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 SLC25A24-204ENST00000569674 2357 ntBASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC44A1Q8WWI5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 UNC93B8-201ENST00000511903 705 ntBASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SLC44A1Q8WWI5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.53■■□□□ 1.04
SLC44A1Q8WWI5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms