Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim60Q8VI40 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim60Q8VI40 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim60Q8VI40 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim60Q8VI40 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim60Q8VI40 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim60Q8VI40 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.66■□□□□ 0.74
Trim60Q8VI40 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim60Q8VI40 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim60Q8VI40 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Trim60Q8VI40 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim60Q8VI40 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim60Q8VI40 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim60Q8VI40 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.64■□□□□ 0.74
Trim60Q8VI40 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.64■□□□□ 0.73
Trim60Q8VI40 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim60Q8VI40 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim60Q8VI40 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Spcs1-204ENSMUST00000226782 949 ntBASIC19.63■□□□□ 0.73
Trim60Q8VI40 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim60Q8VI40 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim60Q8VI40 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.61■□□□□ 0.73
Trim60Q8VI40 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Gm9847-201ENSMUST00000052528 599 ntBASIC19.61■□□□□ 0.73
Trim60Q8VI40 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim60Q8VI40 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim60Q8VI40 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms