Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Gm38205-201ENSMUST00000192243 258 ntBASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Gm10493-201ENSMUST00000097270 612 ntBASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpap2Q8VC34 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.92■□□□□ 0.94
Rpap2Q8VC34 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpap2Q8VC34 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap2Q8VC34 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.9■□□□□ 0.94
Rpap2Q8VC34 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap2Q8VC34 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Reep4-203ENSMUST00000226563 1444 ntBASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rpap2Q8VC34 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap2Q8VC34 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.86■□□□□ 0.93
Rpap2Q8VC34 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms