Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf4Q8K4J2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Gm12366-201ENSMUST00000121722 873 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Gm5786-201ENSMUST00000085368 882 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Fst-202ENSMUST00000223640 2612 ntBASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf4Q8K4J2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf4Q8K4J2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf4Q8K4J2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ebf4Q8K4J2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Gm10399-202ENSMUST00000202768 748 ntBASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.33■□□□□ 0.36
Ebf4Q8K4J2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ebf4Q8K4J2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ebf4Q8K4J2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms