Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scube3Q66PY1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scube3Q66PY1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Scube3Q66PY1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Scube3Q66PY1 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.98■□□□□ 0.79
Scube3Q66PY1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scube3Q66PY1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scube3Q66PY1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scube3Q66PY1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scube3Q66PY1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scube3Q66PY1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scube3Q66PY1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.97■□□□□ 0.79
Scube3Q66PY1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scube3Q66PY1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scube3Q66PY1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.96■□□□□ 0.79
Scube3Q66PY1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scube3Q66PY1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scube3Q66PY1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scube3Q66PY1 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.96■□□□□ 0.79
Scube3Q66PY1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Gm27405-201ENSMUST00000184201 112 ntBASIC19.95■□□□□ 0.78
Scube3Q66PY1 Gm7291-201ENSMUST00000199147 382 ntBASIC19.95■□□□□ 0.78
Scube3Q66PY1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scube3Q66PY1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scube3Q66PY1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scube3Q66PY1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Gm7514-201ENSMUST00000209475 934 ntBASIC19.94■□□□□ 0.78
Scube3Q66PY1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scube3Q66PY1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scube3Q66PY1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scube3Q66PY1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.92■□□□□ 0.78
Scube3Q66PY1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scube3Q66PY1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms