Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.09■□□□□ 0.81
Znf235Q61116 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Znf235Q61116 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Znf235Q61116 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Znf235Q61116 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Znf235Q61116 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Znf235Q61116 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Znf235Q61116 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Znf235Q61116 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Znf235Q61116 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.07■□□□□ 0.8
Znf235Q61116 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Znf235Q61116 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Gm12527-201ENSMUST00000117967 564 ntBASIC20.07■□□□□ 0.8
Znf235Q61116 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.07■□□□□ 0.8
Znf235Q61116 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Znf235Q61116 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Znf235Q61116 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Znf235Q61116 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Znf235Q61116 Gm26524-201ENSMUST00000192339 390 ntBASIC20.06■□□□□ 0.8
Znf235Q61116 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.06■□□□□ 0.8
Znf235Q61116 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Znf235Q61116 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Znf235Q61116 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf235Q61116 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf235Q61116 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf235Q61116 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf235Q61116 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.05■□□□□ 0.8
Znf235Q61116 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.05■□□□□ 0.8
Znf235Q61116 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Znf235Q61116 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Znf235Q61116 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.05■□□□□ 0.8
Znf235Q61116 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Znf235Q61116 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Znf235Q61116 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Znf235Q61116 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.04■□□□□ 0.8
Znf235Q61116 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.04■□□□□ 0.8
Znf235Q61116 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Znf235Q61116 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Znf235Q61116 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.03■□□□□ 0.8
Znf235Q61116 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.03■□□□□ 0.8
Znf235Q61116 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Znf235Q61116 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.02■□□□□ 0.8
Znf235Q61116 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.02■□□□□ 0.8
Znf235Q61116 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Znf235Q61116 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Znf235Q61116 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Znf235Q61116 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Znf235Q61116 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.01■□□□□ 0.79
Znf235Q61116 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Znf235Q61116 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.01■□□□□ 0.79
Znf235Q61116 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.01■□□□□ 0.79
Znf235Q61116 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.01■□□□□ 0.79
Znf235Q61116 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Znf235Q61116 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Znf235Q61116 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Znf235Q61116 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20■□□□□ 0.79
Znf235Q61116 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Znf235Q61116 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Znf235Q61116 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms