Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm7290-201ENSMUST00000104990 617 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Gm12918-201ENSMUST00000120234 636 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Gm15710-201ENSMUST00000121821 636 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Gm5075-201ENSMUST00000196916 622 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shroom1Q5SX79 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shroom1Q5SX79 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Gm13534-201ENSMUST00000121169 513 ntBASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom1Q5SX79 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Shroom1Q5SX79 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Gm4968-201ENSMUST00000071458 858 ntBASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom1Q5SX79 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Shroom1Q5SX79 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom1Q5SX79 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom1Q5SX79 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom1Q5SX79 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom1Q5SX79 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom1Q5SX79 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom1Q5SX79 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom1Q5SX79 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms