Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Brf2Q3UAW9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Gm26833-201ENSMUST00000180899 440 ntBASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Brf2Q3UAW9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.89■□□□□ 0.46
Brf2Q3UAW9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Brf2Q3UAW9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Brf2Q3UAW9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Brf2Q3UAW9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Gm40848-201ENSMUST00000221998 324 ntBASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Brf2Q3UAW9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Brf2Q3UAW9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Brf2Q3UAW9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Brf2Q3UAW9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.84■□□□□ 0.45
Brf2Q3UAW9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms