Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rufy4Q3TYX8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rufy4Q3TYX8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rufy4Q3TYX8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rufy4Q3TYX8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rufy4Q3TYX8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rufy4Q3TYX8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rufy4Q3TYX8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21■□□□□ 0.95
Rufy4Q3TYX8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21■□□□□ 0.95
Rufy4Q3TYX8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rufy4Q3TYX8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Gm12933-201ENSMUST00000120203 872 ntBASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rufy4Q3TYX8 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.97■□□□□ 0.95
Rufy4Q3TYX8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rufy4Q3TYX8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Rufy4Q3TYX8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rufy4Q3TYX8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Gm13148-201ENSMUST00000118892 745 ntBASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Gm10602-201ENSMUST00000098239 609 ntBASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rufy4Q3TYX8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rufy4Q3TYX8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms