Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Thumpd3P97770 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.29■□□□□ 0.68
Thumpd3P97770 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Thumpd3P97770 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Thumpd3P97770 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Thumpd3P97770 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Thumpd3P97770 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Thumpd3P97770 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.27■□□□□ 0.68
Thumpd3P97770 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Thumpd3P97770 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Thumpd3P97770 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Thumpd3P97770 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Gm8493-201ENSMUST00000196881 489 ntBASIC19.27■□□□□ 0.68
Thumpd3P97770 Gm43017-201ENSMUST00000198296 752 ntBASIC19.27■□□□□ 0.68
Thumpd3P97770 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.27■□□□□ 0.68
Thumpd3P97770 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Thumpd3P97770 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd3P97770 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Thumpd3P97770 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Thumpd3P97770 AA386476-201ENSMUST00000098781 1665 ntBASIC19.27■□□□□ 0.67
Thumpd3P97770 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Thumpd3P97770 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.26■□□□□ 0.67
Thumpd3P97770 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Thumpd3P97770 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Thumpd3P97770 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd3P97770 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.25■□□□□ 0.67
Thumpd3P97770 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Thumpd3P97770 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Thumpd3P97770 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.25■□□□□ 0.67
Thumpd3P97770 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Thumpd3P97770 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd3P97770 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Thumpd3P97770 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Thumpd3P97770 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Thumpd3P97770 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Thumpd3P97770 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Thumpd3P97770 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.24■□□□□ 0.67
Thumpd3P97770 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd3P97770 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.23■□□□□ 0.67
Thumpd3P97770 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd3P97770 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd3P97770 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd3P97770 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Thumpd3P97770 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.23■□□□□ 0.67
Thumpd3P97770 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd3P97770 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd3P97770 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms