Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cacna1aP97445 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cacna1aP97445 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Cacna1aP97445 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.61■□□□□ 0.41
Cacna1aP97445 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1aP97445 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1aP97445 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.6■□□□□ 0.41
Cacna1aP97445 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1aP97445 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.6■□□□□ 0.41
Cacna1aP97445 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.6■□□□□ 0.41
Cacna1aP97445 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.6■□□□□ 0.41
Cacna1aP97445 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cacna1aP97445 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.59■□□□□ 0.41
Cacna1aP97445 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cacna1aP97445 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.59■□□□□ 0.41
Cacna1aP97445 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cacna1aP97445 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.58■□□□□ 0.41
Cacna1aP97445 Gm7860-201ENSMUST00000121190 879 ntBASIC17.58■□□□□ 0.41
Cacna1aP97445 Gm37055-201ENSMUST00000191866 133 ntBASIC17.58■□□□□ 0.41
Cacna1aP97445 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.58■□□□□ 0.4
Cacna1aP97445 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
Cacna1aP97445 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.58■□□□□ 0.4
Cacna1aP97445 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cacna1aP97445 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1aP97445 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1aP97445 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1aP97445 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.57■□□□□ 0.4
Cacna1aP97445 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cacna1aP97445 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
Cacna1aP97445 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cacna1aP97445 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cacna1aP97445 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cacna1aP97445 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1aP97445 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacna1aP97445 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.55■□□□□ 0.4
Cacna1aP97445 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.55■□□□□ 0.4
Cacna1aP97445 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacna1aP97445 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.55■□□□□ 0.4
Cacna1aP97445 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1aP97445 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Gm12896-201ENSMUST00000118430 226 ntBASIC17.54■□□□□ 0.4
Cacna1aP97445 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.54■□□□□ 0.4
Cacna1aP97445 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.54■□□□□ 0.4
Cacna1aP97445 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cacna1aP97445 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.54■□□□□ 0.4
Cacna1aP97445 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cacna1aP97445 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1aP97445 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cacna1aP97445 Gm2559-201ENSMUST00000201323 363 ntBASIC17.53■□□□□ 0.4
Cacna1aP97445 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cacna1aP97445 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.53■□□□□ 0.4
Cacna1aP97445 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1aP97445 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms