Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC091305.1-201ENST00000479476 895 ntBASIC19.16■□□□□ 0.66
CSNK1A1P48729 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK1A1P48729 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSNK1A1P48729 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CSNK1A1P48729 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 RASA4CP-201ENST00000424092 1398 ntBASIC19.16■□□□□ 0.66
CSNK1A1P48729 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 C11orf96-202ENST00000528572 1834 ntBASIC19.16■□□□□ 0.66
CSNK1A1P48729 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK1A1P48729 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 AL031432.3-201ENST00000607698 485 ntBASIC19.15■□□□□ 0.66
CSNK1A1P48729 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.15■□□□□ 0.66
CSNK1A1P48729 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1A1P48729 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CSNK1A1P48729 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1A1P48729 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1A1P48729 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1A1P48729 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CSNK1A1P48729 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CSNK1A1P48729 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CSNK1A1P48729 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1A1P48729 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CSNK1A1P48729 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CSNK1A1P48729 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 AC142381.2-201ENST00000566120 298 ntBASIC19.13■□□□□ 0.65
CSNK1A1P48729 AL136967.2-201ENST00000623968 743 ntBASIC19.13■□□□□ 0.65
CSNK1A1P48729 TSPY26P-201ENST00000476365 1326 ntBASIC19.13■□□□□ 0.65
CSNK1A1P48729 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1A1P48729 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1A1P48729 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CSNK1A1P48729 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1A1P48729 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1A1P48729 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1A1P48729 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.12■□□□□ 0.65
CSNK1A1P48729 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1A1P48729 CLDN5-201ENST00000403084 2357 ntBASIC19.12■□□□□ 0.65
CSNK1A1P48729 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1A1P48729 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.11■□□□□ 0.65
CSNK1A1P48729 SUDS3P1-201ENST00000505831 966 ntBASIC19.11■□□□□ 0.65
CSNK1A1P48729 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.11■□□□□ 0.65
CSNK1A1P48729 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1A1P48729 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1A1P48729 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1A1P48729 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1A1P48729 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms