Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YIP3YNL044W 531 nt4.61□□□□□ -1.67
SSM4P40318 KAR1YNL188W 1302 nt4.6□□□□□ -1.67
SSM4P40318 YDR124WYDR124W 975 nt4.6□□□□□ -1.67
SSM4P40318 BUD26YDR241W 288 nt4.6□□□□□ -1.67
SSM4P40318 ECM34YHL043W 513 nt4.6□□□□□ -1.67
SSM4P40318 FMC1YIL098C 468 nt4.6□□□□□ -1.67
SSM4P40318 AHP1YLR109W 531 nt4.6□□□□□ -1.67
SSM4P40318 USB1YLR132C 873 nt4.6□□□□□ -1.67
SSM4P40318 YMR316C-AYMR316C-A 312 nt4.6□□□□□ -1.67
SSM4P40318 YAR1YPL239W 603 nt4.6□□□□□ -1.67
SSM4P40318 PDR5YOR153W 4536 nt4.6□□□□□ -1.67
SSM4P40318 MSE1YOL033W 1611 nt4.6□□□□□ -1.67
SSM4P40318 SNF2YOR290C 5112 nt4.6□□□□□ -1.67
SSM4P40318 HOM3YER052C 1584 nt4.6□□□□□ -1.67
SSM4P40318 GIP4YAL031C 2283 nt4.59□□□□□ -1.67
SSM4P40318 YKR015CYKR015C 1707 nt4.59□□□□□ -1.67
SSM4P40318 SWP82YFL049W 1872 nt4.59□□□□□ -1.67
SSM4P40318 PST1YDR055W 1335 nt4.59□□□□□ -1.67
SSM4P40318 POP8YBL018C 402 nt4.59□□□□□ -1.67
SSM4P40318 EAF7YNL136W 1278 nt4.59□□□□□ -1.67
SSM4P40318 PMS1YNL082W 2622 nt4.59□□□□□ -1.67
SSM4P40318 YLR345WYLR345W 1530 nt4.59□□□□□ -1.68
SSM4P40318 ARP4YJL081C 1470 nt4.58□□□□□ -1.68
SSM4P40318 YDR526CYDR526C 471 nt4.58□□□□□ -1.68
SSM4P40318 TCA17YEL048C 459 nt4.58□□□□□ -1.68
SSM4P40318 YGR016WYGR016W 573 nt4.58□□□□□ -1.68
SSM4P40318 YHR180WYHR180W 492 nt4.58□□□□□ -1.68
SSM4P40318 HOT13YKL084W 351 nt4.58□□□□□ -1.68
SSM4P40318 RAD33YML011C 534 nt4.58□□□□□ -1.68
SSM4P40318 GIS2YNL255C 462 nt4.58□□□□□ -1.68
SSM4P40318 UAF30YOR295W 687 nt4.58□□□□□ -1.68
SSM4P40318 RPA135YPR010C 3612 nt4.58□□□□□ -1.68
SSM4P40318 MEF1YLR069C 2286 nt4.57□□□□□ -1.68
SSM4P40318 SER3YER081W 1410 nt4.57□□□□□ -1.68
SSM4P40318 RDI1YDL135C 609 nt4.57□□□□□ -1.68
SSM4P40318 ARG3YJL088W 1017 nt4.57□□□□□ -1.68
SSM4P40318 SAW1YAL027W 786 nt4.57□□□□□ -1.68
SSM4P40318 PAM18YLR008C 507 nt4.57□□□□□ -1.68
SSM4P40318 YNL171CYNL171C 369 nt4.57□□□□□ -1.68
SSM4P40318 TFB2YPL122C 1542 nt4.57□□□□□ -1.68
SSM4P40318 TRE2YOR256C 2430 nt4.57□□□□□ -1.68
SSM4P40318 DBP5YOR046C 1449 nt4.56□□□□□ -1.68
SSM4P40318 SLX8YER116C 825 nt4.56□□□□□ -1.68
SSM4P40318 YGL041W-AYGL041W-A 465 nt4.56□□□□□ -1.68
SSM4P40318 YGL214WYGL214W 486 nt4.56□□□□□ -1.68
SSM4P40318 YGR107WYGR107W 450 nt4.56□□□□□ -1.68
SSM4P40318 MAK16YAL025C 921 nt4.56□□□□□ -1.68
SSM4P40318 YOL118CYOL118C 309 nt4.56□□□□□ -1.68
SSM4P40318 YOR114WYOR114W 885 nt4.56□□□□□ -1.68
SSM4P40318 YBR089WYBR089W 600 nt4.56□□□□□ -1.68
SSM4P40318 AME1YBR211C 975 nt4.56□□□□□ -1.68
SSM4P40318 GPI1YGR216C 1830 nt4.56□□□□□ -1.68
SSM4P40318 YHR202WYHR202W 1809 nt4.56□□□□□ -1.68
SSM4P40318 NMD2YHR077C 3270 nt4.56□□□□□ -1.68
SSM4P40318 MDM30YLR368W 1797 nt4.56□□□□□ -1.68
SSM4P40318 YCR024C-BYCR024C-B 267 nt4.55□□□□□ -1.68
SSM4P40318 RPC11YDR045C 333 nt4.55□□□□□ -1.68
SSM4P40318 YJR071WYJR071W 369 nt4.55□□□□□ -1.68
SSM4P40318 RIM9YMR063W 720 nt4.55□□□□□ -1.68
SSM4P40318 YGK3YOL128C 1128 nt4.55□□□□□ -1.68
SSM4P40318 PSF3YOL146W 585 nt4.55□□□□□ -1.68
SSM4P40318 TMC1YOR052C 453 nt4.55□□□□□ -1.68
SSM4P40318 TIM12YBR091C 330 nt4.55□□□□□ -1.68
SSM4P40318 CHA4YLR098C 1947 nt4.55□□□□□ -1.68
SSM4P40318 PTR3YFR029W 2037 nt4.55□□□□□ -1.68
SSM4P40318 NAM2YLR382C 2685 nt4.55□□□□□ -1.68
SSM4P40318 RRN7YJL025W 1545 nt4.55□□□□□ -1.68
SSM4P40318 TOS8YGL096W 831 nt4.54□□□□□ -1.68
SSM4P40318 IZH4YOL101C 939 nt4.54□□□□□ -1.68
SSM4P40318 NCE102YPR149W 522 nt4.54□□□□□ -1.68
SSM4P40318 MRP2YPR166C 348 nt4.54□□□□□ -1.68
SSM4P40318 snR42snR42 351 nt4.54□□□□□ -1.68
SSM4P40318 NUP85YJR042W 2235 nt4.54□□□□□ -1.68
SSM4P40318 YFL040WYFL040W 1623 nt4.54□□□□□ -1.68
SSM4P40318 HAP4YKL109W 1665 nt4.53□□□□□ -1.68
SSM4P40318 DCV1YFR012W 609 nt4.53□□□□□ -1.68
SSM4P40318 YIL102C-AYIL102C-A 228 nt4.53□□□□□ -1.68
SSM4P40318 YLR444CYLR444C 303 nt4.53□□□□□ -1.68
SSM4P40318 FOL3YMR113W 1284 nt4.53□□□□□ -1.68
SSM4P40318 LDS2YOL047C 1071 nt4.53□□□□□ -1.68
SSM4P40318 CSH1YBR161W 1131 nt4.53□□□□□ -1.68
SSM4P40318 LDH1YBR204C 1128 nt4.53□□□□□ -1.68
SSM4P40318 KTR6YPL053C 1341 nt4.53□□□□□ -1.68
SSM4P40318 URC2YDR520C 2319 nt4.53□□□□□ -1.68
SSM4P40318 CLG1YGL215W 1359 nt4.52□□□□□ -1.69
SSM4P40318 AIM14YGL160W 1713 nt4.52□□□□□ -1.69
SSM4P40318 MRPL32YCR003W 552 nt4.52□□□□□ -1.69
SSM4P40318 YOS1YER074W-A 258 nt4.52□□□□□ -1.69
SSM4P40318 ISC10YER180C 804 nt4.52□□□□□ -1.69
SSM4P40318 ANB1YJR047C 474 nt4.52□□□□□ -1.69
SSM4P40318 NTO1YPR031W 2247 nt4.52□□□□□ -1.69
SSM4P40318 BUD6YLR319C 2367 nt4.52□□□□□ -1.69
SSM4P40318 MIT1YEL007W 2001 nt4.52□□□□□ -1.69
SSM4P40318 UBP5YER144C 2418 nt4.52□□□□□ -1.69
SSM4P40318 ULS1YOR191W 4860 nt4.51□□□□□ -1.69
SSM4P40318 TSR1YDL060W 2367 nt4.51□□□□□ -1.69
SSM4P40318 tF(GAA)DtF(GAA)D 73 nt4.51□□□□□ -1.69
SSM4P40318 tF(GAA)NtF(GAA)N 73 nt4.51□□□□□ -1.69
SSM4P40318 ERV29YGR284C 933 nt4.51□□□□□ -1.69
SSM4P40318 YAL065CYAL065C 387 nt4.51□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 53.3 ms