Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
TPM3P06753 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TPM3P06753 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.06■■□□□ 1.44
TPM3P06753 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TPM3P06753 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.06■■□□□ 1.44
TPM3P06753 TSPY13P-201ENST00000338964 914 ntBASIC24.06■■□□□ 1.44
TPM3P06753 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.06■■□□□ 1.44
TPM3P06753 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
TPM3P06753 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TPM3P06753 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TPM3P06753 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TPM3P06753 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TPM3P06753 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
TPM3P06753 MIR6722-201ENST00000617286 78 ntBASIC24.05■■□□□ 1.44
TPM3P06753 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.05■■□□□ 1.44
TPM3P06753 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.05■■□□□ 1.44
TPM3P06753 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.05■■□□□ 1.44
TPM3P06753 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.05■■□□□ 1.44
TPM3P06753 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.05■■□□□ 1.44
TPM3P06753 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TPM3P06753 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TPM3P06753 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TPM3P06753 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TPM3P06753 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TPM3P06753 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.04■■□□□ 1.44
TPM3P06753 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.04■■□□□ 1.44
TPM3P06753 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.04■■□□□ 1.44
TPM3P06753 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.04■■□□□ 1.44
TPM3P06753 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TPM3P06753 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TPM3P06753 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TPM3P06753 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.03■■□□□ 1.44
TPM3P06753 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TPM3P06753 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
TPM3P06753 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 AC137630.3-201ENST00000607245 391 ntBASIC24.02■■□□□ 1.44
TPM3P06753 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.02■■□□□ 1.44
TPM3P06753 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TPM3P06753 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TPM3P06753 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.02■■□□□ 1.43
TPM3P06753 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TPM3P06753 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TPM3P06753 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TPM3P06753 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.01■■□□□ 1.43
TPM3P06753 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.01■■□□□ 1.43
TPM3P06753 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.01■■□□□ 1.43
TPM3P06753 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TPM3P06753 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TPM3P06753 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC24.01■■□□□ 1.43
TPM3P06753 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.01■■□□□ 1.43
TPM3P06753 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TPM3P06753 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24■■□□□ 1.43
TPM3P06753 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24■■□□□ 1.43
TPM3P06753 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24■■□□□ 1.43
TPM3P06753 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TPM3P06753 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24■■□□□ 1.43
TPM3P06753 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24■■□□□ 1.43
TPM3P06753 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.99■■□□□ 1.43
TPM3P06753 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.99■■□□□ 1.43
TPM3P06753 CA15P2-201ENST00000611168 834 ntBASIC23.99■■□□□ 1.43
TPM3P06753 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TPM3P06753 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.99■■□□□ 1.43
TPM3P06753 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TPM3P06753 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.99■■□□□ 1.43
TPM3P06753 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.99■■□□□ 1.43
TPM3P06753 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.99■■□□□ 1.43
TPM3P06753 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TPM3P06753 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TPM3P06753 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms