Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPK1BO75841 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UPK1BO75841 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1BO75841 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1BO75841 AP005212.1-201ENST00000581547 1997 ntBASIC18.81■□□□□ 0.6
UPK1BO75841 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPK1BO75841 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPK1BO75841 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK1BO75841 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1BO75841 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.81■□□□□ 0.6
UPK1BO75841 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPK1BO75841 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UPK1BO75841 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
UPK1BO75841 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK1BO75841 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UPK1BO75841 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK1BO75841 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UPK1BO75841 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 AC018445.3-201ENST00000624177 1945 ntBASIC18.8■□□□□ 0.6
UPK1BO75841 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK1BO75841 SMPD5-203ENST00000639008 1464 ntBASIC18.79■□□□□ 0.6
UPK1BO75841 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UPK1BO75841 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.79■□□□□ 0.6
UPK1BO75841 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.79■□□□□ 0.6
UPK1BO75841 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 LINC01960-201ENST00000563759 1884 ntBASIC18.79■□□□□ 0.6
UPK1BO75841 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
UPK1BO75841 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK1BO75841 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.78■□□□□ 0.6
UPK1BO75841 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UPK1BO75841 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.78■□□□□ 0.6
UPK1BO75841 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.78■□□□□ 0.6
UPK1BO75841 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.78■□□□□ 0.6
UPK1BO75841 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
UPK1BO75841 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 BX323043.1-201ENST00000641006 1765 ntBASIC18.78■□□□□ 0.6
UPK1BO75841 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UPK1BO75841 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK1BO75841 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.77■□□□□ 0.6
UPK1BO75841 SMG8-203ENST00000578922 2178 ntBASIC18.77■□□□□ 0.6
UPK1BO75841 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 OXCT2P1-201ENST00000447263 1535 ntBASIC18.77■□□□□ 0.6
UPK1BO75841 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UPK1BO75841 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPK1BO75841 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
UPK1BO75841 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
UPK1BO75841 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
UPK1BO75841 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPK1BO75841 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UPK1BO75841 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK1BO75841 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms