Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BckdkO55028 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
BckdkO55028 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BckdkO55028 Gm7291-201ENSMUST00000199147 382 ntBASIC17.6■□□□□ 0.41
BckdkO55028 Gm18671-201ENSMUST00000214826 683 ntBASIC17.6■□□□□ 0.41
BckdkO55028 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BckdkO55028 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BckdkO55028 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.59■□□□□ 0.41
BckdkO55028 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.59■□□□□ 0.41
BckdkO55028 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BckdkO55028 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BckdkO55028 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BckdkO55028 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BckdkO55028 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.58■□□□□ 0.4
BckdkO55028 Gm27405-201ENSMUST00000184201 112 ntBASIC17.58■□□□□ 0.4
BckdkO55028 Gm42778-201ENSMUST00000199644 553 ntBASIC17.58■□□□□ 0.4
BckdkO55028 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BckdkO55028 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BckdkO55028 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.57■□□□□ 0.4
BckdkO55028 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.57■□□□□ 0.4
BckdkO55028 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BckdkO55028 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BckdkO55028 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.56■□□□□ 0.4
BckdkO55028 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BckdkO55028 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BckdkO55028 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BckdkO55028 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BckdkO55028 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BckdkO55028 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BckdkO55028 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BckdkO55028 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BckdkO55028 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BckdkO55028 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.55■□□□□ 0.4
BckdkO55028 Gm26571-201ENSMUST00000181399 666 ntBASIC17.55■□□□□ 0.4
BckdkO55028 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BckdkO55028 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BckdkO55028 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Gm10849-201ENSMUST00000100397 618 ntBASIC17.54■□□□□ 0.4
BckdkO55028 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BckdkO55028 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BckdkO55028 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BckdkO55028 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.53■□□□□ 0.4
BckdkO55028 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
BckdkO55028 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
BckdkO55028 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BckdkO55028 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BckdkO55028 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms