Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.57■□□□□ 0.4
Hps1O08983 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.57■□□□□ 0.4
Hps1O08983 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Gm6139-201ENSMUST00000079261 882 ntBASIC17.57■□□□□ 0.4
Hps1O08983 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hps1O08983 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps1O08983 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Hps1O08983 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hps1O08983 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hps1O08983 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Hps1O08983 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hps1O08983 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Hps1O08983 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.56■□□□□ 0.4
Hps1O08983 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.56■□□□□ 0.4
Hps1O08983 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps1O08983 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Hps1O08983 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps1O08983 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.55■□□□□ 0.4
Hps1O08983 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hps1O08983 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Hps1O08983 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Hps1O08983 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.54■□□□□ 0.4
Hps1O08983 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.54■□□□□ 0.4
Hps1O08983 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hps1O08983 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.54■□□□□ 0.4
Hps1O08983 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hps1O08983 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Hps1O08983 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.53■□□□□ 0.4
Hps1O08983 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.53■□□□□ 0.4
Hps1O08983 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hps1O08983 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Hps1O08983 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.52■□□□□ 0.4
Hps1O08983 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Hps1O08983 Gm5874-201ENSMUST00000096101 508 ntBASIC17.52■□□□□ 0.4
Hps1O08983 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hps1O08983 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hps1O08983 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Hps1O08983 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hps1O08983 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hps1O08983 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hps1O08983 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Hps1O08983 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms