Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.35■□□□□ 0.37
Shisa8J3QNX5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.34■□□□□ 0.37
Shisa8J3QNX5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa8J3QNX5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa8J3QNX5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa8J3QNX5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa8J3QNX5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa8J3QNX5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa8J3QNX5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa8J3QNX5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.31■□□□□ 0.36
Shisa8J3QNX5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa8J3QNX5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Shisa8J3QNX5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Gm15820-201ENSMUST00000201566 728 ntBASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa8J3QNX5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa8J3QNX5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa8J3QNX5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms