Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Gm11236J3QMS7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11236J3QMS7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11236J3QMS7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.02■□□□□ 0.8
Gm11236J3QMS7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11236J3QMS7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.02■□□□□ 0.8
Gm11236J3QMS7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11236J3QMS7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm11236J3QMS7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm11236J3QMS7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11236J3QMS7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20■□□□□ 0.79
Gm11236J3QMS7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20■□□□□ 0.79
Gm11236J3QMS7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20■□□□□ 0.79
Gm11236J3QMS7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm11236J3QMS7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11236J3QMS7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11236J3QMS7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11236J3QMS7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Gm12896-201ENSMUST00000118430 226 ntBASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Gm10252-201ENSMUST00000209541 832 ntBASIC19.97■□□□□ 0.79
Gm11236J3QMS7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms