Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm5878E9PUB3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm5878E9PUB3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm5878E9PUB3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm5878E9PUB3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Gm13241-201ENSMUST00000094493 780 ntBASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm5878E9PUB3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Smad6-203ENSMUST00000179458 273 ntBASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm5878E9PUB3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm5878E9PUB3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm5878E9PUB3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms