Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC026185.1-201ENST00000445748 174 ntBASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 AC011767.1-201ENST00000617410 1153 ntBASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TBC1D3FA6NER0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 RAP2CP1-201ENST00000605103 478 ntBASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 AC055733.4-201ENST00000638462 1354 ntBASIC21.48■■□□□ 1.03
TBC1D3FA6NER0 LINC00526-201ENST00000581067 1875 ntBASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 HLA-L-209ENST00000420110 1011 ntBASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TBC1D3FA6NER0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TBC1D3FA6NER0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.45■■□□□ 1.02
TBC1D3FA6NER0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 AL034346.1-201ENST00000568244 1277 ntBASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.44■■□□□ 1.02
TBC1D3FA6NER0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.43■■□□□ 1.02
TBC1D3FA6NER0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms