Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.47■□□□□ 0.71
4933424G06RikA0A140LIP3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.47■□□□□ 0.71
4933424G06RikA0A140LIP3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
4933424G06RikA0A140LIP3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
4933424G06RikA0A140LIP3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
4933424G06RikA0A140LIP3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
4933424G06RikA0A140LIP3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
4933424G06RikA0A140LIP3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4933424G06RikA0A140LIP3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
4933424G06RikA0A140LIP3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
4933424G06RikA0A140LIP3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
4933424G06RikA0A140LIP3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
4933424G06RikA0A140LIP3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
4933424G06RikA0A140LIP3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
4933424G06RikA0A140LIP3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms