Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv30A0A0B4J1P1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv30A0A0B4J1P1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv30A0A0B4J1P1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv30A0A0B4J1P1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv30A0A0B4J1P1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv30A0A0B4J1P1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm9988-201ENSMUST00000069786 435 ntBASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv30A0A0B4J1P1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms